Basic Information
Locus ID:
gene-QOZ80_5BG0417690
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
CPK13
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 5499622 | 5504141 | + | gene-QOZ80_5BG0417690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 61,565.54 Da | 42.24 | 83.73 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 67 | 325 | 2.4324E-136 | - |
| CDD | cd00051 | EFh | 445 | 507 | 1.31592E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 444 | 507 | 6.1E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 372 | 432 | 8.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 68 | 326 | 1.0E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 333 | 5.4E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 532 | 1.98E-44 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 153 | 2.2E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 335 | 510 | 2.8E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 334 | 6.5E-62 | - |
| SMART | SM00054 | efh_1 | 409 | 437 | 22.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 3.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 373 | 401 | 1.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 6.9E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 326 | 1.5E-97 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 14.624987 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 369 | 404 | 16.18713 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 326 | 47.594139 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 14.569197 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 97 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 382 | 394 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | NP_001345325.1 | Calcium-dependent protein kinase 16-like [Zea mays] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | K7VGN7 | Putative calcium-dependent protein kinase family protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d010579 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology