Basic Information
Locus ID:
gene-QOZ80_5BG0417430
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 5285562 | 5287915 | - | gene-QOZ80_5BG0417430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 65,065.73 Da | 28.11 | 89.98 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 406 | 588 | 1.47212E-85 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 47 | 208 | 8.75258E-92 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 241 | 357 | 2.5E-20 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 44 | 211 | 2.3E-35 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 452 | 517 | 7.8E-13 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 44 | 217 | 1.63E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 236 | 383 | 3.04E-31 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 406 | 600 | 6.79E-40 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 230 | 393 | 1.0E-39 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 41 | 217 | 1.8E-60 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 400 | 590 | 8.3E-56 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 39 | 600 | 3.1E-217 | IPR012110 |
| Coils | Coil | Coil | 605 | 605 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_025808731.1 | pyruvate decarboxylase 1 [Panicum hallii] | 0 |
| Q0DHF6 | Pyruvate decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9U840 | pyruvate decarboxylase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_35927 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology