Basic Information
Locus ID:
gene-QOZ80_5BG0415010
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 3708614 | 3712505 | - | gene-QOZ80_5BG0415010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 72,001.32 Da | 33.90 | 63.69 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 449 | 575 | 9.68844E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 258 | 388 | 2.66723E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 152 | 6.35641E-46 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 152 | 8.0E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 446 | 575 | 1.5E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 258 | 388 | 1.3E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 247 | 387 | 1.83E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 432 | 575 | 1.24E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 2.22E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 152 | 3.6E-56 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 239 | 388 | 4.3E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 429 | 575 | 2.6E-50 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 446 | 576 | 2.7E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 153 | 6.2E-38 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 258 | 389 | 3.0E-35 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 435 | 576 | 48.685368 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 247 | 389 | 47.23159 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 153 | 50.045349 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_022680957.1 | jacalin-related lectin 3 [Setaria italica] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UAV3 | Jacalin-type lectin domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36873 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology