Basic Information
Locus ID:
gene-QOZ80_5BG0413900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 3034723 | 3038012 | + | gene-QOZ80_5BG0413900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 113,820.86 Da | 38.78 | 98.25 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 721 | 1014 | 6.34037E-87 | - |
| Pfam | PF13855 | Leucine rich repeat | 158 | 216 | 3.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 306 | 365 | 1.6E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 521 | 542 | 0.49 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 6.1E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 719 | 1011 | 1.1E-40 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 132 | 147 | 0.46 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 74 | 374 | 1.11E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 710 | 1012 | 6.15E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 379 | 626 | 8.84E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 294 | 4.8E-64 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 1037 | 2.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 376 | 7.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 377 | 634 | 7.7E-67 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 799 | 7.8E-18 | - |
| SMART | SM00220 | serkin_6 | 715 | 1013 | 9.2E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 566 | 590 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 253 | 277 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 518 | 542 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 131 | 155 | 9.5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 1013 | 35.368229 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 749 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 864 | 876 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 521 | 534 | 6.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 566 | 579 | 6.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025805251.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HAM9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G208600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology