Basic Information
Locus ID:
gene-QOZ80_5BG0412790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 2356645 | 2357530 | - | gene-QOZ80_5BG0412790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.24 | 20,975.52 Da | 62.62 | 60.48 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 26 | 119 | 2.35958E-35 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 26 | 120 | 2.2E-19 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 27 | 120 | 2.88E-26 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 12 | 122 | 4.9E-32 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 1 | 120 | 8.6E-11 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 1 | 120 | 27.854164 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_039837307.1 | jacalin-related lectin 19-like isoform X1 [Panicum virgatum] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9U9M3 | Jacalin-type lectin domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology