Basic Information
Locus ID:
gene-QOZ80_5BG0410300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 704834 | 705346 | + | gene-QOZ80_5BG0410300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 18,446.74 Da | 33.53 | 91.47 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 98 | 160 | 2.03525E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 21 | 83 | 4.3E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 97 | 159 | 1.4E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 12 | 160 | 1.57E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 93 | 165 | 2.2E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 92 | 6.2E-21 | - |
| SMART | SM00054 | efh_1 | 134 | 162 | 3.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 58 | 86 | 0.028 | IPR002048 |
| SMART | SM00054 | efh_1 | 22 | 50 | 4.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 98 | 126 | 1.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 94 | 129 | 14.931837 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 18 | 53 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 130 | 165 | 12.755995 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 54 | 89 | 10.133827 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 31 | 43 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 107 | 119 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 67 | 79 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 143 | 155 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_006655624.2 | probable calcium-binding protein CML14 [Oryza brachyantha] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J6BEA6 | Calcium-binding protein CML14 OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0010g8367 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology