Basic Information
Locus ID:
gene-QOZ80_5AG0406700
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 64758417 | 64760684 | - | gene-QOZ80_5AG0406700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 78,474.56 Da | 49.21 | 85.95 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 40 | 234 | 3.2268E-54 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 390 | 671 | 1.57545E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 386 | 608 | 6.5E-47 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 23 | 238 | 3.0E-41 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 21 | 250 | 1.96E-47 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 368 | 694 | 1.64E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 356 | 467 | 3.4E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 20 | 240 | 1.1E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 690 | 1.2E-57 | - |
| SMART | SM00220 | serkin_6 | 384 | 679 | 1.6E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 680 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 515 | 527 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 390 | 413 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 123 | 129 | - | IPR019825 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025806514.1 | L-type lectin-domain containing receptor kinase VIII.2-like [Panicum hallii] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811RZU3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS58887 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology