Basic Information
Locus ID:
gene-QOZ80_5AG0406460
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 64550833 | 64552423 | - | gene-QOZ80_5AG0406460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 46,465.40 Da | 51.28 | 84.10 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 23 | 49 | 3.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 64 | 3.14E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 49 | 1.4E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 50 | 8.59666 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 415 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002439218.1 | uncharacterized protein LOC8068169 isoform X1 [Sorghum bicolor] | 0 |
| TrEMBL | A0A3L6SY38 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G11330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH05.1039 |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_5AG0406450, gene-QOZ80_5AG0406460 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_064756, gene-QYE76_064757 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g08460.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015880 |