HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5AG0406410
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5A 64539265 64539990 - gene-QOZ80_5AG0406410
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.10 26,615.33 Da 63.18 87.84 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 6 48 5.2E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 4 172 1.57E-13 IPR036047
Gene3D G3DSA:1.20.1280.50 - 5 46 3.1E-8 -
SMART SM00256 fbox_2 7 50 0.0012 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021303226.1 uncharacterized protein LOC8068167 [Sorghum bicolor] 0
TrEMBL A0A5J9U2W1 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34138 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0406410, gene-QOZ80_5BG0454530
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0521620.1, HORVU.MOREX.r3.6HG0621080.1
Poaceae Lolium multiflorum 7 gene-QYE76_041979, gene-QYE76_059304, gene-QYE76_061079 ...
gene-QYE76_061080, gene-QYE76_061081, gene-QYE76_064753, gene-QYE76_064758
Poaceae Paspalum vaginatum 1 gene-BS78_09G028800
Poaceae Puccinellia tenuiflora 5 Pt_Chr0104272, Pt_Chr0105542, Pt_Chr0105579, Pt_Chr0303388 ...
Pt_Chr0403061
Poaceae Thinopyrum elongatum 8 Tel5E01G712100, Tel5E01G712200, Tel5E01G712300 ...
Tel5E01G712400, Tel5E01G712600, Tel5E01G712700, Tel5E01G712800, Tel5E01G713100
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG064740, gene_TRIDC6BG059860
Poaceae Triticum aestivum 25 TraesCS1D02G232500.2, TraesCS2A02G265300.1.cds1 ...
TraesCS2B02G276700.1, TraesCS2D02G258200.1, TraesCS3B02G481700.1, TraesCS5A02G451000.1, TraesCS5A02G451100.1, TraesCS5A02G451200.1, TraesCS5A02G451300.1, TraesCS5B02G459400.1, TraesCS5B02G459500.1, TraesCS5B02G459600.1, TraesCS5B02G459700.1, TraesCS5B02G459800.1.cds1, TraesCS5B02G459900.1, TraesCS5B02G460000.1, TraesCS5B02G460100.1, TraesCS5D02G461000.1, TraesCS5D02G461100.1, TraesCS5D02G461200.1, TraesCS5D02G461300.1, TraesCS5D02G461400.1, TraesCS5D02G461500.1, TraesCS6A02G341000.1, TraesCS6B02G372400.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.