Basic Information
Locus ID:
gene-QOZ80_5AG0403180
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine Rich repeats (2 copies)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 61399465 | 61401593 | + | gene-QOZ80_5AG0403180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 33,932.50 Da | 36.40 | 95.77 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 147 | 167 | 0.093 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 75 | 134 | 2.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 71 | 4.4E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 192 | 6.33E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 209 | 3.5E-51 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 124 | 137 | 2.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 145 | 158 | 2.4E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025806586.1 | protein NSP-INTERACTING KINASE 3-like [Panicum hallii] | 0 |
| TrEMBL | A0A5J9U1L2 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33352 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH05.1121 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0403180, gene-QOZ80_5BG0451600 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-23548 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g26520 |