Basic Information
Locus ID:
gene-QOZ80_5AG0399050
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56472341 | 56472871 | + | gene-QOZ80_5AG0399050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 18,526.60 Da | 29.33 | 67.16 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 28 | 176 | 6.8702E-78 | - |
| Pfam | PF00314 | Thaumatin family | 32 | 136 | 1.9E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 176 | 2.35E-57 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 143 | 1.4E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 144 | 176 | 6.2E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 28 | 176 | 4.8E-47 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 142 | 176 | 0.0015 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 145 | 3.7E-44 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 176 | 35.318634 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 166 | 175 | 6.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 6.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 81 | 110 | 6.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 116 | 132 | 6.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 69 | 80 | 6.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 6.5E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_037444447.1 | thaumatin-like protein [Triticum dicoccoides] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WJK0 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology