Basic Information
Locus ID:
gene-QOZ80_5AG0399000
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56406460 | 56406987 | - | gene-QOZ80_5AG0399000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 18,355.22 Da | 36.76 | 62.57 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 175 | 2.00586E-74 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 135 | 3.6E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 175 | 3.66E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 175 | 2.2E-50 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 175 | 4.3E-38 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 148 | 1.4E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 142 | 175 | 0.071 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 175 | 34.077515 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 2.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 115 | 131 | 2.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 2.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 2.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 2.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 2.8E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_037444447.1 | thaumatin-like protein [Triticum dicoccoides] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WJK0 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology