Basic Information
Locus ID:
gene-QOZ80_5AG0398990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56401537 | 56402058 | - | gene-QOZ80_5AG0398990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.46 | 18,109.89 Da | 27.41 | 58.67 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 25 | 173 | 4.51911E-75 | - |
| Pfam | PF00314 | Thaumatin family | 29 | 133 | 6.3E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 22 | 173 | 2.35E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 141 | 2.3E-43 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 142 | 173 | 3.4E-5 | IPR037176 |
| SMART | SM00205 | tha2 | 25 | 173 | 5.0E-36 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 144 | 2.8E-42 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 140 | 173 | 0.011 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 22 | 173 | 34.294708 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 66 | 77 | 2.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 78 | 107 | 2.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 113 | 129 | 2.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 24 | 36 | 2.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 163 | 172 | 2.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 44 | 53 | 2.7E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_020160634.1 | thaumatin-like protein [Aegilops tauschii subsp. strangulata] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WJK0 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology