Basic Information
Locus ID:
gene-QOZ80_5AG0398970
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56376211 | 56376732 | - | gene-QOZ80_5AG0398970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 18,300.69 Da | 33.38 | 70.52 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 26 | 173 | 2.40726E-62 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 148 | 1.5E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 173 | 1.57E-46 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 173 | 4.0E-47 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 173 | 5.4E-26 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 172 | 7.8E-41 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 173 | 27.662476 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 1.2E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 1.2E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 163 | 172 | 1.2E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 1.2E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 1.2E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 79 | 108 | 1.2E-37 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_002443620.1 | thaumatin-like protein [Sorghum bicolor] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9BI90 | PR-5 OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology