Basic Information
Locus ID:
gene-QOZ80_5AG0398960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56357689 | 56358219 | - | gene-QOZ80_5AG0398960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 17,913.71 Da | 47.01 | 60.00 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 26 | 176 | 3.93497E-74 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 137 | 7.8E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 176 | 1.19E-54 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 176 | 2.8E-51 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 176 | 4.2E-41 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 136 | 176 | 0.0037 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 150 | 1.2E-45 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 176 | 35.663818 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 81 | 96 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 5.8E-36 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 5.8E-36 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 166 | 175 | 5.8E-36 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 81 | 110 | 5.8E-36 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 118 | 134 | 5.8E-36 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75050.1 | Pathogenesis-related thaumatin superfamily protein. | 0 |
| RefSeq | XP_051222985.1 | thaumatin-like pathogenesis-related protein 3 [Lolium perenne] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WLP6 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology