Basic Information
Locus ID:
gene-QOZ80_5AG0398940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56344846 | 56345568 | - | gene-QOZ80_5AG0398940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 25,505.99 Da | 21.96 | 82.50 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 91 | 221 | 1.1E-26 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 86 | 239 | 1.09E-36 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 86 | 240 | 8.7E-39 | IPR037176 |
| SMART | SM00205 | tha2 | 87 | 240 | 1.2E-15 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 219 | 240 | 4.3 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 33 | 220 | 1.4E-39 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 84 | 240 | 22.919069 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 180 | 196 | 2.5E-16 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 128 | 139 | 2.5E-16 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 86 | 98 | 2.5E-16 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 230 | 239 | 2.5E-16 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WLB8 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology