Basic Information
Locus ID:
gene-QOZ80_5AG0398930
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56334614 | 56335165 | - | gene-QOZ80_5AG0398930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 18,876.16 Da | 20.73 | 73.06 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 32 | 183 | 5.8557E-62 | - |
| Pfam | PF00314 | Thaumatin family | 34 | 150 | 2.0E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 29 | 183 | 2.62E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 29 | 183 | 9.5E-45 | IPR037176 |
| SMART | SM00205 | tha2 | 30 | 183 | 2.6E-31 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 161 | 183 | 0.99 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 161 | 2.4E-42 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 27 | 183 | 27.848644 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 51 | 60 | 1.8E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 73 | 84 | 1.8E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 29 | 41 | 1.8E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 173 | 182 | 1.8E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 85 | 114 | 1.8E-29 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P32938 | Pathogenesis-related protein 1C OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WLB8 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology