Basic Information
Locus ID:
gene-QOZ80_5AG0398500
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 55725545 | 55733962 | + | gene-QOZ80_5AG0398500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 93,553.06 Da | 51.68 | 73.51 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 267 | 773 | 2.6E-53 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 265 | 824 | 7.06E-95 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 250 | 482 | 1.3E-67 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 578 | 827 | 5.9E-39 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 267 | 824 | 38.8587 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 268 | 283 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_025808312.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Panicum hallii] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WLX9 | Ubiquitin carboxyl-terminal hydrolase OS=Eragrostis curvula OX=38414 GN=EJB05_00264 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology