HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5AG0398020
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Calcium-binding EGF-like domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr5A 55209248 55210157 + gene-QOZ80_5AG0398020
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.47 24,917.30 Da 33.98 86.42 0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 35 99 7.5E-11 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G16260.3 - 0
RefSeq XP_034586816.1 wall-associated receptor kinase 3-like [Setaria viridis] 0
Swiss-Prot Q9SA25 Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 0
TrEMBL A0A835FKY0 GUB_WAK_bind domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_008767 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 6 AH05.4064, AH05.4065, BH05.4160, BH05.4161, CH05.4382 ...
CH05.4383
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_5AG0397990, gene-QOZ80_5AG0398020 ...
gene-QOZ80_5AG0398030, gene-QOZ80_5AG0398050, gene-QOZ80_5BG0446600, gene-QOZ80_5BG0446630
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.5HG0427440.1, HORVU.MOREX.r3.5HG0427450.1 ...
HORVU.MOREX.r3.5HG0531280.1, HORVU.MOREX.r3.5HG0531310.1, HORVU.MOREX.r3.5HG0531340.1
Poaceae Lolium multiflorum 7 gene-QYE76_000977, gene-QYE76_000979, gene-QYE76_028935 ...
gene-QYE76_060285, gene-QYE76_060287, gene-QYE76_060321, gene-QYE76_060322
Poaceae Oryza coarctata 1 Oco23G010440
Poaceae Oryza sativa 5 LOC_Os03g44050.1, LOC_Os03g44140.1, LOC_Os12g42040.1 ...
LOC_Os12g42060.1, LOC_Os12g42070.1
Poaceae Paspalum vaginatum 4 gene-BS78_08G148000, gene-BS78_08G148500 ...
gene-BS78_08G148600, gene-BS78_08G148900
Poaceae Puccinellia tenuiflora 4 Pt_Chr0106202, Pt_Chr0404489, Pt_Chr0704476, Pt_Chr0704499
Poaceae Sporobolus alterniflorus 6 Chr04G019120, Chr06G019960, Chr19G007610, Chr19G007630 ...
Chr27G009090, Chr27G009120
Poaceae Thinopyrum elongatum 6 Tel5E01G086400, Tel5E01G086500, Tel5E01G089600 ...
Tel5E01G807800, Tel5E01G807900, Tel5E01G808400
Poaceae Triticum dicoccoides 12 gene_TRIDC4AG052680, gene_TRIDC4AG052690 ...
gene_TRIDC4AG052700, gene_TRIDC4AG052710, gene_TRIDC4AG052730, gene_TRIDC5AG005490, gene_TRIDC5AG005500, gene_TRIDC5BG005800, gene_TRIDC5BG005810, gene_TRIDC5BG077760, gene_TRIDC5BG077770, gene_TRIDC5BG077780
Poaceae Triticum aestivum 12 TraesCS4A02G351600.1, TraesCS4A02G351700.1 ...
TraesCS5A02G035200.1, TraesCS5A02G035300.1, TraesCS5B02G034935.1, TraesCS5B02G035000.1, TraesCS5B02G521800.1, TraesCS5D02G043400.1, TraesCS5D02G043500.1, TraesCS5D02G520500.1, TraesCS5D02G520600.1, TraesCS5D02G520800.1
Poaceae Zea mays 1 Zm00001eb031770_P001
Poaceae Zoysia japonica 4 nbis-gene-44515, nbis-gene-44516, nbis-gene-47503 ...
nbis-gene-47506
Poaceae Zoysia macrostachya 2 Zma_g25339, Zma_g26132
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.