Basic Information
Locus ID:
gene-QOZ80_5AG0397900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 55027654 | 55028823 | + | gene-QOZ80_5AG0397900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 39,511.45 Da | 52.04 | 88.55 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 25 | 58 | 3.2E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 72 | 1.44E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 18 | 63 | 7.6E-9 | - |
| SMART | SM00256 | fbox_2 | 26 | 70 | 0.0041 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 70 | 9.788908 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002442530.1 | uncharacterized protein LOC8084401 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9WMG9 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00368 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH05.4050, AH05.4051, BH02.1064, BH05.4152, CH05.4370 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0397900, gene-QOZ80_5AG0397910 ... |
| Poaceae | Sporobolus alterniflorus | 6 | Chr04G015920, Chr04G018650, Chr04G019030, Chr06G016670 ... |