Basic Information
Locus ID:
gene-QOZ80_5AG0396890
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 54001229 | 54004256 | - | gene-QOZ80_5AG0396890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 28,165.48 Da | 54.42 | 65.11 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 10 | 255 | 1.8E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 142 | 245 | 3.63E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 142 | 258 | 8.3E-45 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 147 | 246 | 25.23744 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 92 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_039840132.1 | auxin-responsive protein IAA30-like [Panicum virgatum] | 0 |
| P0C132 | Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1BNB1 | Auxin-responsive protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_023635 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology