Basic Information
Locus ID:
gene-QOZ80_5AG0396640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 53545034 | 53547942 | - | gene-QOZ80_5AG0396640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 50,358.75 Da | 37.69 | 76.86 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 350 | 402 | 5.83437E-16 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 319 | 1.6E-51 | IPR000719 |
| Pfam | PF00412 | LIM domain | 350 | 405 | 7.5E-11 | IPR001781 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 343 | 375 | 1.89E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 321 | 1.12E-69 | IPR011009 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 376 | 421 | 2.4E-10 | - |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 344 | 440 | 6.3E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 110 | 4.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 343 | 2.9E-55 | - |
| SMART | SM00220 | serkin_6 | 38 | 324 | 1.9E-35 | IPR000719 |
| SMART | SM00132 | lim_4 | 349 | 401 | 1.4E-14 | IPR001781 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 324 | 38.520111 | IPR000719 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 348 | 408 | 12.4345 | IPR001781 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00478 | LIM zinc-binding domain signature. | 350 | 384 | - | IPR001781 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 66 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039840064.1 | protein DA1-related 1-like isoform X2 [Panicum virgatum] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0VAD4 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG564801 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0396640, gene-QOZ80_5BG0444920 |
| Poaceae | Triticum aestivum | 1 | TraesCS3D02G030400.1 |