Basic Information
Locus ID:
gene-QOZ80_5AG0394730
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 50548412 | 50564180 | - | gene-QOZ80_5AG0394730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 89,662.40 Da | 37.70 | 85.37 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 701 | 729 | 7.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 546 | 584 | 3.5E-6 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 19 | 300 | 6.0E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 302 | 8.36E-65 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 456 | 760 | 1.56E-38 | IPR036322 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 6.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 315 | 1.7E-46 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 458 | 772 | 3.0E-52 | IPR015943 |
| SMART | SM00320 | WD40_4 | 643 | 684 | 76.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 544 | 584 | 7.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 687 | 729 | 3.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 601 | 633 | 22.0 | IPR001680 |
| SMART | SM00220 | serkin_6 | 18 | 305 | 8.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 303 | 35.778114 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 710 | 729 | 8.603614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 552 | 593 | 14.451798 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 552 | 587 | 11.761044 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 571 | 585 | - | IPR019775 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015616462.1 | uncharacterized protein LOC4350061 [Oryza sativa Japonica Group] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | Q2R8X9 | Protein kinase domain containing protein, expressed OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g10640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0394730, gene-QOZ80_5BG0442940 ... |