Basic Information
Locus ID:
gene-QOZ80_5AG0391230
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 44463155 | 44464183 | - | gene-QOZ80_5AG0391230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 37,660.61 Da | 53.63 | 89.59 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 140 | 1.26621E-4 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 155 | 269 | 2.43691E-48 | - |
| Pfam | PF00651 | BTB/POZ domain | 160 | 269 | 6.5E-24 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 32 | 143 | 2.78E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 269 | 3.06E-29 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 147 | 267 | 7.6E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 143 | 5.5E-7 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 273 | 342 | 3.8E-19 | - |
| SMART | SM00225 | BTB_4 | 169 | 273 | 5.3E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 169 | 236 | 17.603428 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037462391.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WPS2 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01519 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0007870, gene-QOZ80_1BG0056650 ... |