HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5AG0385350
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5A 23617304 23618509 - gene-QOZ80_5AG0385350
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.54 44,188.07 Da 42.81 86.83 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 16 72 5.67E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004960769.1 uncharacterized protein LOC101769844 [Setaria italica] 0
TrEMBL A0A5J9V362 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21414 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH05.512, BH05.518, CH05.584
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_2BG0164990, gene-QOZ80_5AG0380930 ...
gene-QOZ80_5AG0385220, gene-QOZ80_5AG0385230, gene-QOZ80_5AG0385330, gene-QOZ80_5AG0385340, gene-QOZ80_5AG0385350, gene-QOZ80_5BG0428070, gene-QOZ80_5BG0432410, gene-QOZ80_5BG0432430
Poaceae Sporobolus alterniflorus 1 Chr06G025820
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.