Basic Information
Locus ID:
gene-QOZ80_5AG0384610
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 22091502 | 22100762 | + | gene-QOZ80_5AG0384610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 121,830.27 Da | 47.12 | 93.78 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 25 | 258 | 1.1E-39 | IPR000719 |
| Pfam | PF18052 | Rx N-terminal domain | 328 | 415 | 1.6E-7 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 494 | 709 | 1.3E-40 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 474 | 740 | 1.71E-55 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 804 | 1034 | 3.74E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 265 | 3.37E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.8.430 | - | 643 | 725 | 5.7E-8 | IPR042197 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 82 | 1.6E-11 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 462 | 633 | 1.1E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 826 | 1057 | 6.8E-23 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 328 | 440 | 4.1E-5 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 726 | 816 | 8.0E-14 | IPR036388 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 278 | 3.5E-50 | - |
| SMART | SM00220 | serkin_6 | 24 | 261 | 2.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 261 | 31.255234 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 53 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 509 | 524 | 9.5E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 927 | 943 | 9.5E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 677 | 691 | 9.5E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 585 | 599 | 9.5E-14 | - |
| Coils | Coil | Coil | 349 | 369 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_039822421.1 | disease resistance protein RPM1-like isoform X1 [Panicum virgatum] | 0 |
| Q9STE7 | Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPP13L3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0P739 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG151500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0384610, gene-QOZ80_5BG0431370 |