Basic Information
Locus ID:
gene-QOZ80_5AG0380720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 16841830 | 16852938 | - | gene-QOZ80_5AG0380720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 79,349.48 Da | 48.42 | 84.37 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 44 | 307 | 7.1E-47 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 338 | 439 | 4.4E-16 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 316 | 5.33E-69 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 334 | 462 | 1.1E-21 | IPR008962 |
| SUPERFAMILY | SSF48452 | TPR-like | 591 | 690 | 2.24E-12 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 589 | 695 | 2.6E-12 | IPR011990 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 334 | 459 | 4.2E-25 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 118 | 4.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 136 | 333 | 1.3E-50 | - |
| SMART | SM00220 | serkin_6 | 44 | 315 | 2.3E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 315 | 35.127949 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 336 | 456 | 19.542662 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 542 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11900.9 | - | 0 |
| RefSeq | XP_008677832.1 | serine/threonine-protein kinase SIK3 homolog isoform X3 [Zea mays] | 0 |
| Q336V9 | Serine/threonine-protein kinase BSK1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=BSK1-2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6F7Q0 | Protein kinase domain-containing protein OS=Zea mays OX=4577 GN=Zm00014a_013062 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |