Basic Information
Locus ID:
gene-QOZ80_5AG0375270
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 10747483 | 10749519 | + | gene-QOZ80_5AG0375270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 76,516.41 Da | 41.99 | 91.73 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 309 | 1.4E-49 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 660 | 2.6E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 669 | 3.37E-45 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 318 | 3.64E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 116 | 1.9E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 338 | 7.3E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 477 | 1.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 677 | 6.0E-30 | - |
| SMART | SM00220 | serkin_6 | 43 | 312 | 6.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 668 | 18.972788 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 312 | 38.421173 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 49 | 72 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 160 | 172 | - | IPR008271 |
| Coils | Coil | Coil | 302 | 322 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25490.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_039801227.1 | wall-associated receptor kinase-like 4 isoform X1 [Panicum virgatum] | 0 |
| Q9LSV3 | Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1 | 0 | |
| TrEMBL | C5YR32 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3008G022300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | CH04.1869, CH05.2817 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0325550.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco22G008390 |
| Poaceae | Oryza sativa | 8 | LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600798 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G153000, Tel7E01G297400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb114030_P001, Zm00001eb114060_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44241 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18068, Zma_g18069 |