halophFGD

Basic Information

Locus ID: gene-QOZ80_5AG0374740

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: proton export across plasma membrane

Maps and Mapping Data

Chromosome/Scaffold	Start	End	Strand	ID
chr5A	10224538	10225038	+	gene-QOZ80_5AG0374740

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.96	18,244.79 Da	27.96	98.19	-0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03754	Domain of unknown function (DUF313)	28	114	1.1E-6	IPR005508
SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	35	119	2.94E-5	IPR015300
Gene3D	G3DSA:2.40.330.10	-	25	122	5.7E-10	IPR015300

Gene Ontology

Molecular Function:

GO:0003677 (DNA binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_037416700.1	uncharacterized protein LOC119279618 [Triticum dicoccoides]	0
TrEMBL	A0A1B6P8A9	TF-B3 domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G124300 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	10	AH02.2296, AH02.3133, AH05.560, AH05.561, BH02.2404, BH05.3 ... CH01.4753, CH01.4754, CH02.2578, CH02.3321
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_1AG0021040, gene-QOZ80_1AG0024550 ... gene-QOZ80_1BG0070870, gene-QOZ80_1BG0074810, gene-QOZ80_1BG0075170, gene-QOZ80_5AG0374740, gene-QOZ80_5BG0421570
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.3HG0219140.1.CDS1 ... HORVU.MOREX.r3.5HG0518880.1.CDS1, HORVU.MOREX.r3.7HG0731330.1.CDS1
Poaceae	Oryza coarctata	4	Oco03G008100, Oco09G004980, Oco10G005030, Oco16G005390
Poaceae	Oryza sativa	2	LOC_Os05g14770.1, LOC_Os08g18060.1
Poaceae	Paspalum vaginatum	5	gene-BS78_02G015600, gene-BS78_02G016500 ... gene-BS78_03G191800, gene-BS78_03G271100, gene-BS78_09G110100
Poaceae	Sporobolus alterniflorus	8	Chr02G015480, Chr03G009010, Chr05G018390, Chr05G023330 ... Chr08G009530, Chr18G004890, Chr22G012240, Chr22G012250
Poaceae	Thinopyrum elongatum	2	Tel3E01G028700, Tel7E01G746400
Poaceae	Triticum aestivum	17	TraesCS2A02G265200.1.cds1, TraesCS2D02G258300.1.cds1 ... TraesCS3A02G015800.1.cds1, TraesCS3A02G016000.1.cds1, TraesCS3B02G310700.1.cds1, TraesCS3D02G004700.1.cds1, TraesCS3D02G013300.1.cds1, TraesCS3D02G276700.1.cds1, TraesCS4A02G249000.1.cds1, TraesCS4D02G064700.1, TraesCS5A02G438200.1.cds1, TraesCS5B02G441000.1.cds1, TraesCS5D02G445400.1.cds1, TraesCS7B02G092600.1.cds1, TraesCS7B02G343200.1.cds1, TraesCS7B02G380000.1.cds1, TraesCSU02G163800.1.cds1
Poaceae	Zea mays	2	Zm00001eb037340_P001, Zm00001eb153680_P001
Poaceae	Zoysia japonica	4	nbis-gene-17899, nbis-gene-17900, nbis-gene-17906 ... nbis-gene-21461
Poaceae	Zoysia macrostachya	2	Zma_g10450, Zma_g27902