Basic Information
Locus ID:
gene-QOZ80_5AG0370320
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 6648110 | 6652599 | - | gene-QOZ80_5AG0370320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 144,515.81 Da | 44.72 | 68.29 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 254 | 340 | 4.01696E-28 | - |
| Pfam | PF00855 | PWWP domain | 255 | 341 | 3.5E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 250 | 359 | 1.32E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 249 | 350 | 4.2E-24 | - |
| SMART | SM00293 | PWWP_4 | 254 | 315 | 1.6E-10 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 256 | 317 | 15.417284 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1192 | 1242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 809 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1276 | 1350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 686 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1290 | 1335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1161 | 1175 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_004961812.1 | uncharacterized protein LOC101771056 isoform X1 [Setaria italica] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6T0V1 | PWWP domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G35370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology