Basic Information
Locus ID:
gene-QOZ80_5AG0370300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 6631049 | 6639093 | + | gene-QOZ80_5AG0370300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 167,763.38 Da | 46.18 | 86.73 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1132 | 1522 | 1.11944E-107 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1178 | 1524 | 3.0E-79 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 130 | 547 | 1.19E-30 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1128 | 1517 | 1.05E-93 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 121 | 555 | 6.7E-43 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1406 | 1522 | 7.2E-34 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1078 | 1296 | 7.0E-37 | - |
| SMART | SM00119 | hect_3 | 1142 | 1524 | 2.0E-96 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1144 | 1524 | 62.163624 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 890 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 890 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 90 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_039837940.1 | E3 ubiquitin-protein ligase UPL4-like [Panicum virgatum] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U7X4 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_35894 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology