Basic Information
Locus ID:
gene-QOZ80_5AG0369000
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 5670173 | 5675450 | + | gene-QOZ80_5AG0369000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 104,587.96 Da | 31.73 | 95.37 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 644 | 908 | 3.28959E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 294 | 354 | 2.1E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 640 | 906 | 9.6E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 3.6E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 410 | 2.89E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 912 | 3.01E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 424 | 1.3E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 714 | 925 | 1.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 187 | 8.0E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 288 | 1.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 612 | 713 | 3.4E-34 | - |
| SMART | SM00220 | serkin_6 | 638 | 911 | 9.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 638 | 911 | 38.94413 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 271 | 293 | 7.280716 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 644 | 666 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 757 | 769 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039837810.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U8X8 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_36127 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology