Basic Information
Locus ID:
gene-QOZ80_5AG0364220
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 2575264 | 2580480 | - | gene-QOZ80_5AG0364220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 93,557.56 Da | 44.94 | 67.42 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 234 | 393 | 2.90977E-26 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 704 | 747 | 1.06231E-16 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 232 | 394 | 4.5E-9 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 576 | 651 | 1.2E-18 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 752 | 809 | 3.9E-23 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 704 | 746 | 2.7E-6 | IPR001841 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 570 | 633 | 9.55E-17 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 642 | 697 | 1.19E-15 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 703 | 751 | 2.41E-6 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 776 | 817 | 8.3E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 699 | 748 | 7.7E-8 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 229 | 453 | 1.2E-24 | - |
| SMART | SM00184 | ring_2 | 705 | 746 | 1.4E-4 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 569 | 638 | 24.970894 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 705 | 746 | 10.92546 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 641 | 704 | 29.989788 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 170 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_039799962.1 | zinc finger protein BRUTUS-like [Panicum virgatum] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0U9M2 | Zinc finger protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG183192 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology