Basic Information
Locus ID:
gene-QOZ80_5AG0361190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
DYW family of nucleic acid deaminases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 634415 | 636013 | + | gene-QOZ80_5AG0361190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 59,608.27 Da | 67.78 | 73.44 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01535 | PPR repeat | 263 | 290 | 8.8E-7 | IPR002885 |
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 437 | 522 | 3.6E-31 | IPR032867 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 291 | 401 | 4.2E-16 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 170 | 290 | 7.8E-6 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 263 | 290 | 5.0E-5 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 260 | 290 | 9.503505 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 163 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_021311222.1 | pentatricopeptide repeat-containing protein At2g15690 [Sorghum bicolor] | 0 |
| Q9ZQE5 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9SJ45 | DYW_deaminase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52612 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology