Basic Information
Locus ID:
gene-QOZ80_4BG0357400
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 42875602 | 42876680 | - | gene-QOZ80_4BG0357400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 17,897.72 Da | 30.87 | 67.67 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 73 | 154 | 3.3E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 61 | 154 | 8.44E-22 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 53 | 162 | 1.7E-26 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 81 | 156 | 15.700684 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_008677963.1 | BTB/POZ and MATH domain-containing protein 1 [Zea mays] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811Q836 | BTB domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS37026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4AG0321680, gene-QOZ80_4AG0321870 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G227200, gene-BS78_05G092100 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr25G013180 |
| Poaceae | Zea mays | 1 | Zm00001eb166870_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-7962 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21111 |