Basic Information
Locus ID:
gene-QOZ80_4BG0355480
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 35949723 | 35960821 | - | gene-QOZ80_4BG0355480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 202,519.80 Da | 49.59 | 86.43 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1458 | 1876 | 1.86648E-121 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1506 | 1881 | 4.9E-81 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 186 | 648 | 1.31E-42 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1450 | 1874 | 1.7E-95 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 170 | 492 | 2.2E-53 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1399 | 1654 | 1.3E-42 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1755 | 1879 | 1.9E-32 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 535 | 653 | 2.1E-5 | IPR011989 |
| SMART | SM00119 | hect_3 | 1472 | 1881 | 5.4E-87 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1482 | 1881 | 57.637409 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1087 | 1101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1029 | 1071 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1087 | 1115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 1009 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 1074 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1130 | 1164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1130 | 1151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 109 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_002447553.2 | E3 ubiquitin-protein ligase UPL3 [Sorghum bicolor] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TPJ3 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_40379 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology