Basic Information
Locus ID:
gene-QOZ80_4BG0354030
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 27157178 | 27157963 | + | gene-QOZ80_4BG0354030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 28,918.49 Da | 55.59 | 82.53 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 146 | 1.08486E-29 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 175 | 252 | 7.9E-19 | IPR000210 |
| Pfam | PF00917 | MATH domain | 41 | 144 | 7.6E-7 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 251 | 8.63E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 148 | 3.27E-32 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 148 | 1.9E-28 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 149 | 259 | 3.5E-27 | IPR011333 |
| SMART | SM00225 | BTB_4 | 184 | 261 | 5.7E-5 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 145 | 20.621067 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 184 | 253 | 16.569328 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_039771080.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W4U3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4BG0354030, gene-QOZ80_8AG0623140 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G002180 |