Basic Information
Locus ID:
gene-QOZ80_4BG0351990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 18236298 | 18237455 | - | gene-QOZ80_4BG0351990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 40,478.12 Da | 42.12 | 95.58 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 6.4E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 260 | 294 | 4.3E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 318 | 359 | 2.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 70 | 361 | 4.08E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 378 | 4.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 240 | 4.4E-45 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 1.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 322 | 346 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 212 | 61.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039803894.1 | receptor-like kinase TMK3 [Panicum virgatum] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UC45 | LRRNT_2 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG315300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1153, CH04.1339 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4BG0351990, gene-QOZ80_9AG0681760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0374020.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_067050 |
| Poaceae | Oryza coarctata | 2 | Oco21G005150, Oco22G006180 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g41430.1, LOC_Os11g26130.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G135600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G021660, Chr07G018000, Chr31G004400 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G266400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG023700, gene_TRIDC4BG025710 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G147700.1, TraesCS4B02G165600.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb112700_P001, Zm00001eb169350_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38701 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18762 |