Basic Information
Locus ID:
gene-QOZ80_4BG0351310
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 17139366 | 17144183 | - | gene-QOZ80_4BG0351310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 116,307.76 Da | 44.57 | 97.68 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 787 | 1007 | 1.95536E-124 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 470 | 764 | 3.10372E-90 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 155 | 355 | 2.97843E-106 | - |
| Pfam | PF00005 | ABC transporter | 173 | 307 | 5.0E-19 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 506 | 712 | 3.5E-32 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 806 | 954 | 9.4E-30 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 470 | 769 | 5.1E-52 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 3 | 137 | 6.15E-11 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 151 | 376 | 1.49E-55 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 781 | 1019 | 6.02E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 773 | 1025 | 1.9E-80 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 434 | 770 | 4.0E-58 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 164 | 410 | 2.9E-67 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1 | 139 | 5.7E-19 | IPR036640 |
| SMART | SM00382 | AAA_5 | 815 | 1008 | 3.4E-9 | IPR003593 |
| SMART | SM00382 | AAA_5 | 182 | 355 | 1.8E-11 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 155 | 378 | 21.968899 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 791 | 1023 | 16.346678 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 472 | 752 | 38.183914 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 1 | 121 | 14.853737 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 280 | 294 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 446 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_021319479.1 | putative ABC transporter C family member 15 [Sorghum bicolor] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9TWG9 | ABC transporter C family member 15 OS=Eragrostis curvula OX=38414 GN=EJB05_39244 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology