Basic Information
Locus ID:
gene-QOZ80_4BG0351070
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 16719788 | 16722639 | + | gene-QOZ80_4BG0351070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 71,601.54 Da | 49.45 | 62.02 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05699 | hAT family C-terminal dimerisation region | 389 | 457 | 1.1E-7 | IPR008906 |
| Pfam | PF04937 | Protein of unknown function (DUF 659) | 222 | 367 | 2.3E-36 | IPR007021 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 238 | 462 | 4.85E-23 | IPR012337 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 569 | - | - |
| Coils | Coil | Coil | 67 | 87 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33406.1 | hAT dimerisation domain-containing protein / transposase-related. | 0 |
| RefSeq | XP_025877600.1 | uncharacterized protein LOC107279693 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A5J9TPN7 | BED-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46468 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | BH01.4753, BH06.686, BH08.2468, BH08.2472, CH05.2087 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0056120, gene-QOZ80_4BG0351070 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_048311, gene-QYE76_055843 |
| Poaceae | Paspalum vaginatum | 15 | gene-BS78_03G023900, gene-BS78_03G199100, gene-BS78_K224500 ... |
| Poaceae | Sporobolus alterniflorus | 11 | Chr03G013220, Chr03G013230, Chr03G013240, Chr05G004880 ... |