Basic Information
Locus ID:
gene-QOZ80_4BG0347900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 13077813 | 13086081 | + | gene-QOZ80_4BG0347900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 77,998.86 Da | 49.25 | 89.50 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 52 | 8.3E-6 | IPR001810 |
| Pfam | PF00646 | F-box domain | 454 | 491 | 2.0E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 60 | 6.54E-12 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 448 | 502 | 2.09E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 140 | 365 | 3.84E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 92 | 383 | 4.8E-17 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 450 | 508 | 4.4E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 63 | 9.1E-7 | - |
| SMART | SM00256 | fbox_2 | 18 | 57 | 0.036 | IPR001810 |
| SMART | SM00256 | fbox_2 | 457 | 496 | 0.87 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58930.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_039819445.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TSP2 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37871 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology