Basic Information
Locus ID:
gene-QOZ80_4BG0347890
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 13066529 | 13073522 | + | gene-QOZ80_4BG0347890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 96,408.83 Da | 45.73 | 89.74 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 44 | 82 | 5.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 178 | 773 | 2.28E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 40 | 115 | 5.23E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 556 | 780 | 1.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 117 | 478 | 1.3E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 30 | 81 | 2.1E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 41 | 91 | 9.762413 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 800 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58930.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_039819445.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TST0 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37869 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology