Basic Information
Locus ID:
gene-QOZ80_4BG0342980
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 9191882 | 9197658 | + | gene-QOZ80_4BG0342980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 88,807.82 Da | 49.65 | 68.73 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 581 | 625 | 0.00633828 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 578 | 619 | 1.05E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 79 | 238 | 1.59E-6 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 571 | 627 | 1.9E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 813 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 698 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_034602583.1 | uncharacterized protein LOC117863099 [Setaria viridis] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A4U6TWQ4 | Tudor domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G165000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology