Basic Information
Locus ID:
gene-QOZ80_4BG0342480
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 8822833 | 8824101 | - | gene-QOZ80_4BG0342480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 45,808.75 Da | 22.82 | 114.55 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 63 | 5.3E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 418 | 2.98E-66 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 168 | 3.9E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 251 | 351 | 1.4E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 169 | 250 | 1.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 422 | 5.8E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 355 | 379 | 72.0 | IPR003591 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33170.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_039775128.1 | LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Panicum virgatum] | 0 |
| O49318 | Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana OX=3702 GN=At2g33170 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6Q6G5 | Putative leucine-rich repeat receptor-like protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM15G13680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0311270, gene-QOZ80_4BG0342480 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2590 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12218, nbisL1-mrna-22882 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18159 |