Basic Information
Locus ID:
gene-QOZ80_4BG0340010
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 7210390 | 7214030 | + | gene-QOZ80_4BG0340010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 41,042.88 Da | 38.63 | 75.87 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00018 | SH3 domain | 306 | 350 | 8.8E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 258 | 356 | 6.07E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 41 | 253 | 1.21E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 40 | 262 | 2.5E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 304 | 356 | 3.9E-15 | - |
| SMART | SM00326 | SH3_2 | 302 | 357 | 2.2E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 299 | 358 | 19.00256 | IPR001452 |
| Coils | Coil | Coil | 144 | 171 | - | - |
| Coils | Coil | Coil | 188 | 208 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021319735.1 | SH3 domain-containing protein 2 isoform X1 [Sorghum bicolor] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TV33 | SH3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_38537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology