Basic Information
Locus ID:
gene-QOZ80_4BG0338070
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
heat shock factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 5899991 | 5901012 | - | gene-QOZ80_4BG0338070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 32,748.45 Da | 53.97 | 59.19 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 11 | 100 | 2.0E-32 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 6 | 100 | 5.89E-35 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 5 | 101 | 1.7E-37 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 7 | 100 | 2.4E-56 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 50 | 74 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 62 | 74 | 1.7E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 49 | 61 | 1.7E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 11 | 34 | 1.7E-19 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 309 | - | - |
| Coils | Coil | Coil | 144 | 178 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11660.1 | winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_015636018.1 | heat stress transcription factor B-2a [Oryza sativa Japonica Group] | 0 |
| Q7XRX3 | Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2A PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0KU31 | HSF_DOMAIN domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology