Basic Information
Locus ID:
gene-QOZ80_4BG0337450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 5468633 | 5469103 | + | gene-QOZ80_4BG0337450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 17,564.38 Da | 69.27 | 95.70 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 91 | 135 | 2.1E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 82 | 141 | 6.36E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 142 | 8.1E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 92 | 134 | 2.6E-6 | IPR001841 |
| SMART | SM00744 | ringv_2 | 91 | 135 | 0.0034 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 92 | 135 | 12.607302 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00305.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_039821910.1 | brassinosteroid-responsive RING protein 1-like [Panicum virgatum] | 0 |
| Q9SI09 | Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6Q6B0 | RING-type domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM15G19480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology