Basic Information
Locus ID:
gene-QOZ80_4BG0336930
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 5132156 | 5138300 | - | gene-QOZ80_4BG0336930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 165,459.27 Da | 39.82 | 98.63 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 1223 | 1443 | 5.65892E-124 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 277 | 565 | 9.01352E-102 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 906 | 1200 | 2.18336E-95 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 591 | 791 | 1.81538E-109 | - |
| Pfam | PF00005 | ABC transporter | 609 | 743 | 1.5E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 280 | 544 | 8.0E-26 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 918 | 1152 | 5.9E-33 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1242 | 1390 | 1.2E-28 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1217 | 1451 | 2.52E-66 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 585 | 808 | 9.26E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 276 | 573 | 9.81E-34 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 907 | 1205 | 1.18E-53 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 601 | 842 | 1.8E-68 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 870 | 1206 | 6.1E-60 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 254 | 574 | 1.1E-46 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1208 | 1461 | 5.2E-81 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1251 | 1443 | 7.8E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 618 | 791 | 1.0E-9 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 908 | 1188 | 37.84927 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 591 | 814 | 21.942221 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1227 | 1459 | 17.053623 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 281 | 557 | 33.650978 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 716 | 730 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 883 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 883 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_039818018.1 | putative ABC transporter C family member 15 [Panicum virgatum] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0Q4V0 | ABC transporter C family member 15 OS=Panicum virgatum OX=38727 GN=PVAP13_7NG311700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology