Basic Information
Locus ID:
gene-QOZ80_4BG0334250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3333538 | 3335187 | + | gene-QOZ80_4BG0334250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 59,418.62 Da | 30.31 | 108.76 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 8.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 226 | 286 | 2.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 485 | 544 | 4.4E-11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 128 | 150 | 0.58 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 298 | 317 | 1.9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 297 | 548 | 2.92E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 362 | 2.65E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 294 | 3.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 549 | 2.9E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 195 | 1.5E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 507 | 531 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 125 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 95.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 344 | 92.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 509 | 531 | 7.265315 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 507 | 520 | 6.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 104 | 117 | 6.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G44700.1 | Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. | 0 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| Q9FIZ3 | LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana OX=3702 GN=GSO2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0TBW1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG061843 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology