Basic Information
Locus ID:
gene-QOZ80_4BG0334200
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3301941 | 3308019 | - | gene-QOZ80_4BG0334200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 91,220.53 Da | 26.67 | 77.23 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 329 | 445 | 3.17639E-46 | - |
| CDD | cd00121 | MATH | 186 | 309 | 7.25549E-19 | IPR002083 |
| CDD | cd00121 | MATH | 486 | 610 | 7.74832E-21 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 630 | 744 | 2.5612E-42 | - |
| Pfam | PF00917 | MATH domain | 492 | 600 | 1.3E-5 | IPR002083 |
| Pfam | PF00917 | MATH domain | 192 | 308 | 7.2E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 334 | 447 | 6.3E-26 | IPR000210 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 3 | 97 | 1.0E-9 | - |
| Pfam | PF00651 | BTB/POZ domain | 636 | 746 | 1.5E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 623 | 745 | 2.16E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 183 | 318 | 2.78E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 325 | 446 | 3.14E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 483 | 616 | 4.25E-27 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 483 | 614 | 5.5E-25 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 746 | 815 | 2.3E-21 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 314 | 474 | 8.1E-48 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 620 | 742 | 5.7E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 183 | 313 | 1.3E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 343 | 448 | 5.3E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 644 | 747 | 1.5E-22 | IPR000210 |
| SMART | SM00061 | math_3 | 186 | 291 | 1.5E-4 | IPR002083 |
| SMART | SM00061 | math_3 | 486 | 592 | 1.3E-6 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 343 | 410 | 17.33456 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 484 | 607 | 18.166395 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 644 | 707 | 16.403872 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 184 | 308 | 17.527157 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 123 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004978248.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9ZQZ7 | BTB domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology